FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | lane4_Index14_1.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 23274863 |
| Filtered Sequences | 0 |
| Sequence length | 90 |
| %GC | 49 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
![[WARN]](Icons/warning.png)
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 5982405 | 2.931069 | 5.1065536 | 2 |
| CCAGG | 4878610 | 2.5922053 | 5.214363 | 1 |
| CCTGG | 4893105 | 2.5853014 | 6.058509 | 1 |
| GAAGA | 4968645 | 2.551709 | 5.2369075 | 2 |
| CTTCT | 5085900 | 2.5348852 | 5.381819 | 1 |
| AAGAA | 4999915 | 2.5080392 | 5.074092 | 2 |
| CTGGA | 4716585 | 2.44999 | 8.541122 | 1 |
| TCCAG | 4592365 | 2.3699632 | 5.3228235 | 2 |
| CTCCT | 4535930 | 2.3125625 | 6.844032 | 1 |
| CTGGG | 4292700 | 2.2829094 | 8.082187 | 1 |
| CAGGA | 4274360 | 2.2328234 | 5.462037 | 1 |
| CTTCA | 4379450 | 2.1951118 | 5.576603 | 1 |
| CTCCA | 4270340 | 2.189456 | 7.245945 | 1 |
| CCCAG | 4145640 | 2.188434 | 6.9087453 | 1 |
| CAGAA | 4117835 | 2.1010222 | 5.0810204 | 1 |
| CTCTG | 3995935 | 2.0505812 | 6.1386604 | 1 |
| CTGGC | 3555035 | 1.8783243 | 5.11608 | 1 |
| TGGAA | 3637100 | 1.8573846 | 5.091713 | 2 |
| CTGAA | 3652915 | 1.8533385 | 5.401655 | 1 |
| CTCAG | 3384965 | 1.7468652 | 5.9509416 | 1 |
| CTTTG | 3397115 | 1.7042456 | 5.035218 | 1 |
| CTTGG | 3159345 | 1.6318759 | 5.283088 | 1 |